Journal article
How threshold behaviour affects the use of subgraphs for network comparison
- Abstract:
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Motivation: A wealth of protein-protein interaction (PPI) data has recently become available. These data are organized as PPI networks and an efficient and biologically meaningful method to compare such PPI networks is needed. As a first step, we would like to compare observed networks to established network models, under the aspect of small subgraph counts, as these are conjectured to relate to functional modules in the PPI network. We employ the software tool GraphCrunch with the Graphle...
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- Publication status:
- Published
- Peer review status:
- Peer reviewed
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- Files:
-
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(Version of record, pdf, 340.0KB)
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- Publisher copy:
- 10.1093/bioinformatics/btq386
Funding
Fundação para a Ciência e a Tecnologia
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Oxford Center for Integrated Systems Biology
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Systems Biology Doctoral Training Center
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Bibliographic Details
- Publisher:
- Oxford University Press Publisher's website
- Journal:
- Bioinformatics Journal website
- Volume:
- 26
- Issue:
- 18
- Pages:
- i611-i617
- Publication date:
- 2010-01-01
- DOI:
- EISSN:
-
1460-2059
- ISSN:
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1367-4803
Item Description
- Language:
- English
- Keywords:
- Subjects:
- UUID:
-
uuid:e8baa813-e09f-4542-bf10-1954eee87bad
- Local pid:
- ora:5908
- Deposit date:
- 2011-11-15
Related Items
Terms of use
- Copyright holder:
- T Rito et al
- Copyright date:
- 2010
- Notes:
- © The Author(s) 2010. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
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