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Dataset

AnalyzER v1

Alternative title:
Network Analysis of the Endoplasmic Reticulum
Version:
v1.0

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Authors/Creators


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Department:
University of Oxford
Role:
Creator, Principal Investigator (PI)

Contributors

Department:
Oxford Brookes University
Role:
Contributor
Department:
Oxford Brookes University
Role:
Contributor
Department:
Oxford Brookes University
Role:
Contributor
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Grant:
RGP0053/2012
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Grant:
BB/R014086/1
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Grant:
BB/M000168/1
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Grant:
BB/M011224/1
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Publisher:
University of Oxford
Publication date:
2018
Version number:
v1.0
Data collected:
2014 - 2018
Keywords:
Subjects:
Documentation:
The AnalyzER program provides quantitative analysis of the morphology and dynamics of the Endoplasmic Reticulum (ER) from confocal time-series. The tubular network and cisternae are automatically segmented and converted to graph representation with nodes at junctions connected by edges along the tubules. The program measures: (i) The length, width, morphology and protein distribution along the ER tubules; (ii) The degree and branch angles at junctions (nodes) in the tubular network; (iii) ... Expand documentation
UUID:
uuid:cb0e2845-2a9c-495a-84f0-4dd2c5164463
Deposit date:
2018-07-19

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